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BGA23
Sessions
Aligning whole genomes using Cactus
Annotating genomes the Ensembl way
Assembling Genomes with the VGP-Galaxy Pipeline
Assembling Mitogenomes from PacBio HiFi reads using MitoHiFi
Assess genome assemblies with Merqury
BUSCO - from QC to gene prediction and phylogenomics
Checking for cobionts in public genomes using BlobToolKit
Classifying Transposable Elements with Earl Grey TE
Compare whole genome assembly alignments using NCBI’s Comparative Genome Viewer (CGV)
EASEL software for eukaryotic structural and functional genome annotation
ENA data retrieval and EMBL-EBI's Biodiversity Portals
ENA Standards and Submission
Genome profiling using GenomeScope
gfastar - a tool suite to assist genome assembly
Introduction to Manual Curation - HiC and JBrowse
Introduction to NextFlow for genomics
OMA and OMArk for homology exploration and gene annotation quality control
Pangenome Assembly and Assessment using Minigraph and Bandage
Querying genome metadata and sequencing projects using GoaT
Scalable telomere-to-telomere assembly with hifiasm
Searching and Downloading Genome Data using NCBI Datasets
Starting a comparative genome study from CNGBdb-datasets, analysis platform, and spatial transcriptomics database
The Treeval pipeline Generating evidence for manual curation
Understanding k-mers and ploidy using Smudgeplot
Visualising genome assembly cobionts by running BlobToolKit locally
BGA23
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Sessions
WorkFlow Tracks 2023
BGA24
Session Documents
TreeVal
TreeVal-Tutorial
sessions
A deep dive into JBrowse 2 functionality
Actioning the CARE Principles in Biodiversity Genomics Data and Metadata using Local Contexts Labels and Notices
Annotating genomes the Ensembl way
ASCC
Assembling Genomes with the VGP-Galaxy Pipeline
BUSCO
Collaborative Annotation with Apollo 3
De novo assembly with Colora
Easel and Entap
ENA Standards and Submission
Exploring Satellite DNA using ModDotPlot
Gene prediction with BRAKER3
Genome profiling using GenomeScope
genome-note-publications
Gfastar-a tool suite to assist genome assembly
Inkscaping-graphs
Introduction to Manual Curation - HiC and JBrowse
Introduction to phylogenetic analysis
Manual curation of bird microchromosomes with HiC and gene mapping
OMA and OMArk for homology exploration and gene annotation quality control
Production in Galaxy for users and developers
Querying genome metadata and sequencing projects using GoaT
T2T with Verko
Thinking in Cobiont Space
ToL Assembly Pipeline
ToL Core Lab - Interactive DNA decision making and Q&A
Tree of Life Core Lab - Wet lab protocols
TreeVal-Generating evidence for manual curation
Understanding k-mers and ploidy using Smudgeplot
Wise Ancestors
Homepage for BGA24!
Workflow Tracks for 2024
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Tag: #BGA24
Tag: #BGA24
32 items with this tag.
Oct 18, 2024
Wise Ancestors
#BGA24/sessions
#Talk
Oct 18, 2024
ToL Core Lab - Interactive DNA decision making and Q&A
#BGA24/sessions
#Talk
Oct 18, 2024
Tree of Life Core Lab - Wet lab protocols
#BGA24/sessions
#Talk
Oct 18, 2024
T2T with Verko
#BGA24/sessions
#GitPod
#Assembly
#Workshop
#T2T
Oct 18, 2024
Understanding k-mers and ploidy using Smudgeplot
#BGA24/sessions
#GitPod
#Tools
#Kmers
#Ploidy
Oct 18, 2024
ToL Assembly Pipeline
#BGA24/sessions
Oct 18, 2024
Introduction to phylogenetic analysis
#BGA24/sessions
#GitPod
#Workshop
#BIoinfoBasics
Oct 18, 2024
OMA and OMArk for homology exploration and gene annotation quality control
#BGA24/sessions
#GitPod
#Workshop
Oct 18, 2024
Exploring Satellite DNA using ModDotPlot
#BGA24/sessions
#GitPod
#Tools
#Visualisation
Oct 18, 2024
Actioning the CARE Principles in Biodiversity Genomics Data and Metadata using Local Contexts Labels and Notices
#BGA24/sessions
#Talk
Oct 18, 2024
A deep dive into JBrowse 2 functionality
#BGA24/sessions
#Talk
#Visualisation
Oct 18, 2024
Inkscaping-graphs
#BGA24/sessions
#GitPod
#Graphs
#Workshop
Oct 18, 2024
Querying genome metadata and sequencing projects using GoaT
#BGA24/sessions
#GitPod
#GoaT
#Tools
Oct 18, 2024
Gfastar-a tool suite to assist genome assembly
#BGA24/sessions
#GitPod
#Tools
Oct 18, 2024
Genome profiling using GenomeScope
#BGA24/sessions
#GitPod
#Tools
#Kmers
Oct 18, 2024
genome-note-publications
#BGA24/sessions
#GitPod
#Pipeline
#Nextflow
Oct 18, 2024
Assembling Genomes with the VGP-Galaxy Pipeline
#BGA24/sessions
#GitPod
#Pipeline
#Galaxy
Oct 18, 2024
Production in Galaxy for users and developers
#BGA24/sessions
#Talk
#Pipelines
Oct 18, 2024
Annotating genomes the Ensembl way
#BGA24/sessions
#GitPod
#Annotation
#Workshop
#Ensembl
Oct 18, 2024
ENA Standards and Submission
#BGA24/sessions
#GitPod
#Standards
#ENA
Oct 18, 2024
Easel and Entap
#BGA24/sessions
#GitPod
#Annotation
#Workshop
Oct 18, 2024
De novo assembly with Colora
#BGA24/sessions
#pipeline
#Snakemake
#assembly
#GitPod
#Workshop
Oct 18, 2024
Thinking in Cobiont Space
#BGA24/sessions
#GitPod
#Annotation
#Workshop
Oct 18, 2024
BUSCO
#BGA24/sessions
#GitPod
#Pipeline
#Workshop
Oct 18, 2024
Manual curation of bird microchromosomes with HiC and gene mapping
#BGA24/sessions
#GitPod
#Curation
#Workshop
Oct 18, 2024
ASCC
#BGA24/sessions
#GitPod
#Pipeline
#Nextflow
#Visualisation
#Cobionts
Oct 18, 2024
Collaborative Annotation with Apollo 3
#BGA24/sessions
#GitPod
#Annotation
Oct 18, 2024
TreeVal-Generating evidence for manual curation
#BGA24/sessions
#GitPod
#Generating_a_reference/2
Oct 18, 2024
Introduction to Manual Curation - HiC and JBrowse
#BGA24/sessions
#GitPod
#Generating_a_reference/3
Oct 18, 2024
Gene prediction with BRAKER3
#BGA24/sessions
#GitPod
#Annotation
#Workshop
Oct 18, 2024
Workflow Tracks for 2024
#workflow-tracks-24
#BGA24
Oct 18, 2024
Homepage for BGA24!
#BGA24
#blog